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T cells are a heterogeneous group of lymphocytes that are derived from the bone marrow and mature in the thymus before being disseminated to secondary lymphoid organs such as the spleen and lymph nodes. They are critical for anti-microbial defense via the promotion of appropriate antigen-specific primary adaptive responses against immunologic threats, the generation of immunologic memory, and the suppression of inappropriate immune responses. Antigen-specific memory responses are the hallmark of the adaptive immune system, and they are significantly more rapid and potent than primary antigen-specific responses. As a result, appropriate memory T cell responses can provide potent and long-lived protection from disease, while a lack of T cell memory may lead to failure of immunity, and inappropriate memory may result in potentially life-threatening immune-mediated diseases. The development of appropriate primary and memory T cell responses is highly complex, and requires the careful integration of diverse cytokine and cell-cell signals, the installation of specific transcriptional programs during differentiation, and profound alterations in proliferative and functional capacity. The rational design of prophylactic interventions such as vaccines to prevent infectious diseases, and the identification of therapeutic targets for the treatment of immune-mediated diseases depend upon a detailed understanding of these molecular mechanisms. In this thesis, I will discuss the cell-signaling and transcriptional bases of T cell effector and memory differentiation and homeostasis, and emphasize newly elucidated roles for the PI3K/Akt pathways, mTOR, and the FoxO transcription factors in the differentiation and regulation of CD8 T cells, and the roles of Bach2 in the differentiation of CD8 T cell memory and the development of CD4 Foxp3+ regulatory T cells. Naïve CD8 T cells respond to infection with viruses or intracellular bacteria, or the emergence of tumor cells by differentiating into cytotoxic T cells. These cytotoxic CD8 T cells are antigen-specific and their cytotoxicity is restricted to cells bearing the pathogen or tumor antigen. Antiviral CD8 T cell responses have been the best characterized. These responses are highly dynamic, and have been classically divided in to three distinct phases: expansion, contraction and memory. Only cells that successfully pass through all three phases may differentiate into bona fide memory cells capable of producing protective secondary responses. Thus, generation of appropriate memory depends upon a variety of molecular mechanisms occurring throughout the process, with critical checkpoints occurring during the initial activation of naïve cells, the successful transition between phases, and the orderly differentiation of T cell subsets within each phase. There is considerable evidence that the PI3K/Akt signaling pathway is activated via engagement of the TCR and co-stimulatory interactions, during the initial activation of naïve T cells by professional antigen-presenting cells. (APCs). Further evidence indicates that the Akt signaling pathway is concurrently modulated by changes in cellular metabolism and signaling by a variety of cytokines including IL-2, IL-7, IL-12 and IL-15. However, how these stimuli collectively activate the PI3K/Akt signaling pathway in vivo, and how this Akt signaling dictates the differentiation process of CD8 T cells during an acute viral infection are yet to be determined. Chapter Three reports the role of Akt signaling on the differentiation of CD8 T cells during an acute viral infection. Using genetic and pharmacological approaches, I have identified Akt as a signal integrator that accepts signals from TCR and cytokines like IL-2 and IL-12, and links downstream targets like mTOR and FoxO to distinct facets of CD8 T cell differentiation. Notably, sustained Akt signaling promotes the terminal differentiation of effector CD8 T cells, which results in the exaggerated contraction and the impaired formation and maintenance of memory CD8 T cells. These changes are induced at least in part through the hyper-activation of mTOR followed by the increased expression of T-bet. Moreover, inactivation of FoxO1 induced by constitutive Akt signaling downregulates IL-7R expression. Conversely, preventing excessive mTOR activation by in vivo rapamycin administration, and the forced expression of IL-7R significantly enhance the formation of memory CD8 T cells. Finally, in vivo inhibition of Akt signaling mitigates impaired generation of memory CD8 T cells. These findings imply that therapeutic modulation of Akt might be a strategy to enhance vaccine-induced immunity. One of several target genes affected by Akt signaling is the transcription factor Bach2. It has been originally identified as a B cell-specific transcription factor that maintains B cell identity and restrains differentiation of plasma cells. Notably, other groups and I have discovered that Bach2 is also expressed in the T cell compartment. Remarkably, CD8 T cells' progression towards terminal differentiation correlates with reduced expression of Bach2. Thus, it is likely that Bach2 regulates the homeostasis of naïve CD8 T cells and the differentiation of memory CD8 T cells, in which Bach2 mRNA is highly expressed. Therefore, in Chapter Four, I have investigated the effects of Bach2 on CD8 T cell differentiation during an acute viral infection. Similar to B cells, Bach2 deficiency promotes terminal differentiation of LCMV-specific CD8 T cells, and prevents efficient effector-to-memory transition in a cell-intrinsic manner. Additionally, in the absence of Bach2, tissue distribution of virus-specific CD8 T cells is affected. Remarkably, in the absence of Bach2, LCMV-specific memory T cells exhibits defective memory maintenance, which results in the gradual attrition of memory CD8 T cells. Together, my studies suggest that Bach2 exerts important effects on the formation and homeostasis of memory CD8 T cells by preventing terminal differentiation and by contributing efficient effector-to-memory transition and maintenance of virus-specific memory CD8 T cells. In contrast to a single effector subset of CD8 T cells, CD4 T cells (also known as helper T cells) can differentiate into various subsets of effector CD4 T cells, in which TH1, TH2, TH17 and follicular helper T cell (TFH) orchestrates immune responses to clear different types of pathogens such as virus, bacteria, fungi and parasites, while regulatory T cells (Treg) tone down activated immune responses in order to prevent immune-mediated pathology. A recent study has reported that the expression of Bach2 is dynamically regulated during Treg cell development. Moreover, I have found that T cells in Bach2-deficient mice show spontaneous activation. These findings have led us to investigate the function of Bach2 on Treg cell development and homeostasis. As described in Chapter Five, without Bach2, Treg cells exhibit attenuated foxp3 expression, diminished frequencies and numbers, enhanced activation and proliferation, and profound loss of competitive fitness in vivo. Importantly, Bach2 deficiency redirects the Treg differentiation program into a TH2 effector program by the increased expression of TH2-driving transcription factor, Gata3. Additionally, perturbations in the conversion of induced Treg cells in the periphery induced by Bach2 deficiency undermines optimal establishment of immune tolerance contributed by Treg cells. Strikingly, the abnormal homeostasis of Treg cells seems to be associated with systemic inflammation, especially a life-threatening eosinophilic crystalline pneumonia in Bach2-deficient mice. In summary, Bach2 enforces T cell quiescence, promotes the optimal development and homeostasis of Treg cells, and protects against immune-mediated diseases.
T cells play a vital role mediating adaptive immunity, a specific acquired resistance to an infectious agent produced by the introduction of an antigen. There are a variety of T cell types with different functions. They are called T cells, because they are derived from the thymus gland. This volume discusses how T cells are regulated through the operation of signaling mechanisms. Topics covered include positive and negative selection, early events in T cell receptor engagement, and various T cell subsets.
Surveys the biotechnologically influenced advances in the understanding of systemic autoimmune disorders, highlighting recent research using cell biology and biochemistry, the cloning of immune cells, recombinant DNA, and molecular genetics. Among the topics are the role of complement in inflammatio
Persistent Viral Infections Edited by Rafi Ahmed Emory Vaccine Center, Atlanta, USA and Irvin S. Y. Chen UCLA School of Medicine, Los Angeles, USA During the past decade much of our attention has focused on diseases associated with viral persistence. Major breakthroughs in immunology, and the advent of molecular approaches to study pathogenesis have increased our understanding of the complex virus-host interactions that occur during viral persistence. Persistent Viral Infections focuses on: * The pathogenesis and immunology of chronic infections * Animal models that provide, or have the potential to provide, major insights This volume will be essential reading for virologists, immunologists, oncologists and neurologists.
​This volume provides simple and accessible experiment protocols to explore thymus biology. T-Cell Development: Methods and Protocols is divided into three parts presenting short reviews on T cell development, analysis strategies, protocols for cell preparation, flow cytometry analyses, and multiple aspects of thymocyte biology. As a volume in the highly successful Methods in Molecular Biology series, chapters contain introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls. Concise and easy-to-use, T-Cell Development: Methods and Protocols aims to ensure successful results in the further study of this vital field.
Stem cells have been gaining a lot of attention in recent years. Their unique potential to self-renew and differentiate has turned them into an attractive model for the study of basic biological questions such as cell division, replication, transcription, cell fate decisions, and more. With embryonic stem (ES) cells that can generate each cell type in the mammalian body and adult stem cells that are able to give rise to the cells within a given lineage, basic questions at different developmental stages can be addressed. Importantly, both adult and embryonic stem cells provide an excellent tool for cell therapy, making stem cell research ever more pertinent to regenerative medicine. As the title The Cell Biology of Stem Cells suggests, our book deals with multiple aspects of stem cell biology, ranging from their basic molecular characteristics to the in vivo stem cell trafficking of adult stem cells and the adult stem-cell niche, and ends with a visit to regeneration and cell fate reprogramming. In the first chapter, “Early embryonic cell fate decisions in the mouse”, Amy Ralson and Yojiro Yamanaka describe the mechanisms that support early developmental decisions in the mouse pre-implantation embryo and the current understanding of the source of the most immature stem cell types, which includes ES cells, trophoblast stem (TS) cells and extraembryonic endoderm stem (XEN) cells.
After a failed study mission in France, Abd al-Rahman returns home to Iraq to launch an existentialist movement akin to that of his hero. Convinced that it falls upon him to introduce his country's intellectuals to Sartre's thought, he feels especially qualified by his physical resemblance to the philosopher (except for the crossed eyes) and by his marriage to Germaine, who he claims is the great man's cousin. Meanwhile, his wealth and family prestige guarantee him an idle life spent in drinking, debauchery, and frequenting a well-known nightclub. But is his suicide an act of philosophical despair, or a reaction to his friend's affair with Germaine? A biographer chosen by his presumed friends narrates the story of a somewhat bewildered young man who--like other members of his generation--was searching for a meaning to his life. This parody of the abuses and extravagances of pseudo-philosophers in the Baghdad of the sixties throws into relief the Iraqi intellectual and cultural life of the time and the reversal of fortune of some of Iraq's wealthy and powerful families.
Stem cell science has the potential to impact human reproductive medicine significantly - cutting edge technologies allow the production and regeneration of viable gametes from human stem cells offering potential to preciously infertile patients. Written by leading experts in the field Stem Cells in Reproductive Medicine brings together chapters on the genetics and epigenetics of both the male and female gametes as well as advice on the production and regeneration of gene cells in men and women, trophoblasts and endometrium from human embryonic and adult stem cells. Although focussing mainly on the practical elements of the use of stem cells in reproductive medicine, the book also contains a section on new developments in stem cell research. The book is essential reading for reproductive medicine clinicians, gynecologists and embryologists who want to keep abreast of practical developments in this rapidly developing field.
Immune Surveillance deals with the issues regarding tumor immunology and surveillance, in which the central theme is all about the life span of the mammalian host that is depleted by the environment with mutagenic agents and solutions. The book is divided into six chapters. It includes discussions on the organization and modulation of cell membrane receptors, as well as the origin and expression of membrane antigens. It also covers the topics on the triggering mechanisms for and effector mechanisms activated by the cellular recognition. These topics analyze and evaluate alternatives for the recognition and destruction mechanisms in the knowledge of cell cooperation and requirements for immune recognition. A chapter provides discourse on a solution for the paradox of thriving tumors based on the demonstrable in vitro host immunity. Another discusses the generation of antibody diversity and the theory of self-tolerance. The last chapter explains the evaluation of the evidence for immune surveillance. This reference will be invaluable to those who specialize in immunology.