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This book places the main actors in environmental microbiology, namely the microorganisms, on center stage. Using the modern approach of 16S ribosomal RNA, the book looks at the taxonomy of marine and freshwater bacteria, fungi, protozoa, algae, viruses, and the smaller aquatic animals such as nematodes and rotifers, as well as at the study of unculturable aquatic microorganisms (metagenomics). The peculiarities of water as an environment for microbial growth, and the influence of aquatic microorganisms on global climate and global recycling of nitrogen and sulphur are also examined. The pollution of water is explored in the context of self-purification of natural waters. Modern municipal water purification and disease transmission through water are discussed. Alternative methods for solid waste disposal are related to the economic capability of a society. Viruses are given special attention. By focusing on the basics, this primer will appeal across a wide range of disciplines.
This unique textbook takes a broad look at the rapidly expanding field of freshwater microbiology. Concentrating on the interactions between viruses, bacteria, algae, fungi and micro-invertebrates, the book gives a wide biological appeal. Alongside conventional aspects such as phytoplankton characterisation, seasonal changes and nutrient cycles, the title focuses on the dynamic and applied aspects that are not covered within the current textbooks in the field. Complete coverage of all fresh water biota from viruses to invertebrates Unique focus on microbial interactions including coverage of biofilms, important communities on all exposed rivers and lakes. New information on molecular and microscopical techniques including a study of gene exchange between bacteria in the freshwater environment. Unique emphasis on the applied aspects of freshwater microbiology with particular emphasis on biodegradation and the causes and remediation of eutrophication and algal blooms.
Aquatic microbial ecology, a growing interdisciplinary field, has become increasingly compartmentalized in recent years. The aim of this volume is to propose a framework for biochemical and molecular approaches, which are employed ever more widely in studies of aquatic microbial communities and ecosystem functioning. The book presents state of the art applications of modern molecular research techniques to a range of topics in ectoenzymes microbial carbon metabolism bacterial population dynamics RNA chemotaxonomy of microbial communities plasmids and adaptation to environmental conditions. Written for limnologists, marine biologists, and all researchers interested in environmental microbiology and molecular aspects of ecology, this volume will provide a stimulating introduction to this emerging field.
Aquatic ecosystems are currently experiencing unprecedented levels of impact from human activities including over-exploitation of resources, habitat destruction, pollution and the influence of climate change. The impacts of these activities on the microbial ecology of aquatic environments are only now beginning to be defined. One of the many implications of environmental degradation and climate change is the geographical expansion of disease- causing microbes such as those from the Vibrio genus. Elevating sea surface temperatures correlate with increasing Vibrio numbers and disease in marine animals (e.g. corals) and humans. Contamination of aquatic environments with heavy metals and other pollutants affects microbial ecology with downstream effects on biogeochemical cycles and nutrient turnover. Also of importance is the pollution of aquatic environments with antibiotics, resistance genes and the mobile genetic elements that house resistance genes from human and animal waste. Such contaminated environments act as a source of resistance genes long after an antibiotic has ceased being used in the community. Environments contaminated with mobile genetic elements that are adapted to human commensals and pathogens function to capture new resistance genes for potential reintroduction back into clinical environments. This research topic encompasses these diverse topics and describes the affect(s) of human activity on the microbial ecology and function in aquatic environments and, describes methods of restoration and for modelling disturbances.
For microbiology and environmental microbiology courses, this leading textbook builds on the academic success of the previous edition by including a comprehensive and up-to-date discussion of environmental microbiology as a discipline that has grown in scope and interest in recent years. From environmental science and microbial ecology to topics in molecular genetics, this edition relates environmental microbiology to the work of a variety of life science, ecology, and environmental science investigators. The authors and editors have taken the care to highlight links between environmental microbiology and topics important to our changing world such as bioterrorism and national security with sections on practical issues such as bioremediation, waterborne pathogens, microbial risk assessment, and environmental biotechnology.WHY ADOPT THIS EDITION? New chapters on: - Urban Environmental Microbiology - Bacterial Communities in Natural Ecosystems - Global Change and Microbial Infectious Disease - Microorganisms and Bioterrorism - Extreme Environments (emphasizing the ecology of these environments) - Aquatic Environments (now devoted to its own chapter- was combined with Extreme Environments) Updates to Methodologies: - Nucleic Acid -Based Methods: microarrays, phyloarrays, real-time PCR, metagomics, and comparative genomics - Physiological Methods: stable isotope fingerprinting and functional genomics and proteomics-based approaches - Microscopic Techniques: FISH (fluorescent in situ hybridization) and atomic force microscopy - Cultural Methods: new approaches to enhanced cultivation of environmental bacteria - Environmental Sample Collection and Processing: added section on air sampling
Microbial extracellular enzymes are fundamental to the cycling of elements in aquatic systems. The regulation of these enzymatic reactions in oceans, lakes and streams is under complex multiple control by environmental factors and the metabolic capacities of different taxa and communities. While the environmental control of enzyme-mediated processes has been investigated for over 100 years, in recent years tremendous progress in techniques to characterize the metabolic potential of microbial communities (“omics” techniques) has been made, such as high-throughput sequencing and new analytical algorithms. This book explores the controls, activities, and biogeochemical consequences of enzymes in aquatic environments. It brings together experimental studies and fieldwork conducted with natural microbial communities in marine and freshwater ecosystems as well as physiological, biochemical and molecular studies on microbial communities in these environments, or species isolated from them. Additionally, the book contributes to the ongoing debate on the impact of anthropogenic climate change and pollution on microbes, extracellular enzymes and substrate turnover.
The third edition of this bestselling text has been rigorously updated to reflect major new discoveries and concepts since 2011, especially progress due to extensive application of high-throughput sequencing, single cell genomics and analysis of large datasets. Significant advances in understanding the diversity and evolution of bacteria, archaea, fungi, protists, and viruses are discussed and their importance in marine processes is explored in detail. Now in full colour throughout, all chapters have been significantly expanded, with many new diagrams, illustrations and boxes to aid students’ interest and understanding. Novel pedagogy is designed to encourage students to explore current high-profile research topics. Examples include the impacts of rising CO2 levels on microbial community structure and ocean processes, interactions of microbes with plastic pollution, symbiotic interactions, and emerging diseases of marine life. This is the only textbook addressing such a broad range of topics in the specific area of marine microbiology, now a core topic within broader Marine Science degrees. A Companion Website provides additional online resources for instructors and students, including a summary of key concepts and terminology for each chapter, links to further resources, and flashcards to aid self-assessment.
Freshwater Microbiology: Perspectives of Bacterial Dynamics in Lake Ecosystems provides a comprehensive and systematic analysis of microbial ecology in lakes. It offers basic information on how well the bacterial community composition varies along the spatio-temporal and trophic gradients along with the evaluation of the bioindicator species of bacteria so as to act as a key to predict the trophic status of lake ecosystems. The book helps to identify the factors of potential importance in structuring the bacterial communities in lakes as it delves into the dynamics and diversity of bacterial community composition in relation to various water quality parameters. It helps to identify the possibility of bioremediation plans and devising future policy decisions, with better conservation and management practices. - Provides a comprehensive and systematic analysis of microbial ecology - Helps to identify the factors of potential importance in structuring the bacterial community composition - Gives insight into the bacterial diversity of freshwater lake ecosystems along with their industrial potential - Caters to the needs and aspirations of students and professional researchers
The second edition of Microbiology of Waterborne Diseases describes the diseases associated with water, their causative agents and the ways in which they gain access to water systems. The book is divided into sections covering bacteria, protozoa, and viruses. Other sections detail methods for detecting and identifying waterborne microorganisms, and the ways in which they are removed from water, including chlorine, ozone, and ultraviolet disinfection. The second edition of this handbook has been updated with information on biofilms and antimicrobial resistance. The impact of global warming and climate change phenomena on waterborne illnesses are also discussed. This book serves as an indispensable reference for public health microbiologists, water utility scientists, research water pollution microbiologists environmental health officers, consultants in communicable disease control and microbial water pollution students. Focuses on the microorganisms of most significance to public health, including E. coli, cryptosporidium, and enterovirus Highlights the basic microbiology, clinical features, survival in the environment, and gives a risk assessment for each pathogen Contains new material on antimicrobial resistance and biofilms Covers drinking water and both marine and freshwater recreational bathing waters