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How does an algebraic geometer studying secant varieties further the understanding of hypothesis tests in statistics? Why would a statistician working on factor analysis raise open problems about determinantal varieties? Connections of this type are at the heart of the new field of "algebraic statistics". In this field, mathematicians and statisticians come together to solve statistical inference problems using concepts from algebraic geometry as well as related computational and combinatorial techniques. The goal of these lectures is to introduce newcomers from the different camps to algebraic statistics. The introduction will be centered around the following three observations: many important statistical models correspond to algebraic or semi-algebraic sets of parameters; the geometry of these parameter spaces determines the behaviour of widely used statistical inference procedures; computational algebraic geometry can be used to study parameter spaces and other features of statistical models.
This book and the following second volume is an introduction into modern algebraic geometry. In the first volume the methods of homological algebra, theory of sheaves, and sheaf cohomology are developed. These methods are indispensable for modern algebraic geometry, but they are also fundamental for other branches of mathematics and of great interest in their own. In the last chapter of volume I these concepts are applied to the theory of compact Riemann surfaces. In this chapter the author makes clear how influential the ideas of Abel, Riemann and Jacobi were and that many of the modern methods have been anticipated by them.
Algebraic statistics uses tools from algebraic geometry, commutative algebra, combinatorics, and their computational sides to address problems in statistics and its applications. The starting point for this connection is the observation that many statistical models are semialgebraic sets. The algebra/statistics connection is now over twenty years old, and this book presents the first broad introductory treatment of the subject. Along with background material in probability, algebra, and statistics, this book covers a range of topics in algebraic statistics including algebraic exponential families, likelihood inference, Fisher's exact test, bounds on entries of contingency tables, design of experiments, identifiability of hidden variable models, phylogenetic models, and model selection. With numerous examples, references, and over 150 exercises, this book is suitable for both classroom use and independent study.
This book, first published in 2005, offers an introduction to the application of algebraic statistics to computational biology.
This second volume introduces the concept of shemes, reviews some commutative algebra and introduces projective schemes. The finiteness theorem for coherent sheaves is proved, here again the techniques of homological algebra and sheaf cohomology are needed. In the last two chapters, projective curves over an arbitrary ground field are discussed, the theory of Jacobians is developed, and the existence of the Picard scheme is proved. Finally, the author gives some outlook into further developments- for instance étale cohomology- and states some fundamental theorems.
Algebraic statistics brings together ideas from algebraic geometry, commutative algebra, and combinatorics to address problems in statistics and its applications. Computer algebra provides powerful tools for the study of algorithms and software. However, these tools are rarely prepared to address statistical challenges and therefore new algebraic results need often be developed. This way of interplay between algebra and statistics fertilizes both disciplines. Algebraic statistics is a relatively new branch of mathematics that developed and changed rapidly over the last ten years. The seminal work in this field was the paper of Diaconis and Sturmfels (1998) introducing the notion of Markov bases for toric statistical models and showing the connection to commutative algebra. Later on, the connection between algebra and statistics spread to a number of different areas including parametric inference, phylogenetic invariants, and algebraic tools for maximum likelihood estimation. These connection were highlighted in the celebrated book Algebraic Statistics for Computational Biology of Pachter and Sturmfels (2005) and subsequent publications. In this report, statistical models for discrete data are viewed as solutions of systems of polynomial equations. This allows to treat statistical models for sequence alignment, hidden Markov models, and phylogenetic tree models. These models are connected in the sense that if they are interpreted in the tropical algebra, the famous dynamic programming algorithms (Needleman-Wunsch, Viterbi, and Felsenstein) occur in a natural manner. More generally, if the models are interpreted in a higher dimensional analogue of the tropical algebra, the polytope algebra, parametric versions of these dynamic programming algorithms can be established. Markov bases allow to sample data in a given fibre using Markov chain Monte Carlo algorithms. In this way, Markov bases provide a means to increase the sample size and make statistical tests in inferential statistics more reliable. We will calculate Markov bases using Groebner bases in commutative polynomial rings. The manuscript grew out of lectures on algebraic statistics held for Master students of Computer Science at the Hamburg University of Technology. It appears that the first lecture held in the summer term 2008 was the first course of this kind in Germany. The current manuscript is the basis of a four-hour introductory course. The use of computer algebra systems is at the heart of the course. Maple is employed for symbolic computations, Singular for algebraic computations, and R for statistical computations. The second edition at hand is just a streamlined version of the first one.$cen$dAbstract
A decade after the publication of Contemporary Mathematics Vol. 287, the present volume demonstrates the consolidation of important areas, such as algebraic statistics, computational commutative algebra, and deeper aspects of graphical models. --
The aim of this work is to offer a concise and self-contained 'lecture-style' introduction to the theory of classical rigid geometry established by John Tate, together with the formal algebraic geometry approach launched by Michel Raynaud. These Lectures are now viewed commonly as an ideal means of learning advanced rigid geometry, regardless of the reader's level of background. Despite its parsimonious style, the presentation illustrates a number of key facts even more extensively than any other previous work. This Lecture Notes Volume is a revised and slightly expanded version of a preprint that appeared in 2005 at the University of Münster's Collaborative Research Center "Geometrical Structures in Mathematics".
Algebraic topology is a basic part of modern mathematics, and some knowledge of this area is indispensable for any advanced work relating to geometry, including topology itself, differential geometry, algebraic geometry, and Lie groups. This book provides a detailed treatment of algebraic topology both for teachers of the subject and for advanced graduate students in mathematics either specializing in this area or continuing on to other fields. J. Peter May's approach reflects the enormous internal developments within algebraic topology over the past several decades, most of which are largely unknown to mathematicians in other fields. But he also retains the classical presentations of various topics where appropriate. Most chapters end with problems that further explore and refine the concepts presented. The final four chapters provide sketches of substantial areas of algebraic topology that are normally omitted from introductory texts, and the book concludes with a list of suggested readings for those interested in delving further into the field.
An early but still useful and frequently cited contribution to the science of mathematical economics, this volume is geared toward graduate students in the field. Prerequisites include familiarity with the basic theory of matrices and linear transformations and with elementary calculus. Author Jacob T. Schwartz begins his treatment with an exploration of the Leontief input-output model, which forms a general framework for subsequent material. An introductory treatment of price theory in the Leontief model is followed by an examination of the business-cycle theory, following ideas pioneered by Lloyd Metzler and John Maynard Keynes. In the final section, Schwartz applies the teachings of previous chapters to a critique of the general equilibrium approach devised by Léon Walras as the theory of supply and demand, and he synthesizes the notions of Walras and Keynes. 1961 edition.