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Artificial Intelligence (AI) is an extensive concept that can be interpreted as a concentration on designing computer programs to train machines to accomplish functions like or better than hu-mans. An important subset of AI is Machine Learning (ML), in which a computer is provided with the capacity to learn its own patterns instead of the patterns and restrictions set by a human programmer, thus improving from experience. Deep Learning (DL), as a class of ML techniques, employs multilayered neural networks. The application of AI to plant science research is new and has grown significantly in recent years due to developments in calculation power, proficien-cies of hardware, and software progress. AI algorithms try to provide classifications and predic-tions. As applied to plant breeding, particularly omics data, ML as a given AI algorithm tries to translate omics data, which are intricate and include nonlinear interactions, into precise plant breeding. The applications of AI are extending rapidly and enhancing intensely in sophistication owing to the capability of rapid processing of huge and heterogeneous data. The conversion of AI techniques into accurate plant breeding is of great importance and will play a key role in the new era of plant breeding techniques in the coming years, particularly multi-omics data analysis. Advancements in plant breeding mainly depend upon developing statistical methods that harness the complicated data provided by analytical technologies identifying and quantifying genes, transcripts, proteins, metabolites, etc. The systems biology approach used in plant breeding, which integrates genomics, transcriptomics, proteomics, metabolomics, and other omics data, provides a massive amount of information. It is essential to perform accurate statistical analyses and AI methods such as ML and DL as well as optimization techniques to not only achieve an understanding of networks regulation and plant cell functions but develop high-precision models to predict the reaction of new Genetically Modified (GM) plants in special conditions. The constructed models will be of great economic importance, significantly reducing the time, labor, and instrument costs when finding optimized conditions for the bio-exploitation of plants. This Research Topic covers a wide range of studies on artificial intelligence-assisted plant breeding techniques, which contribute to plant biology and plant omics research. The relevant sub-topics include, but are not restricted to, the following: • AI-assisted plant breeding using omics and multi-omics approaches • Applying AI techniques along with multi-omics to recognize novel biomarkers associated with plant biological activities • Constructing up-to-date ML modeling and analyzing methods for dealing with omics data related to different plant growth processes • AI-assisted omics techniques in the plant defense process • Combining AI-assisted omics and multi-omics techniques using plant system biology approaches • Combining bioinformatics tools with AI approaches to analyze plant omics data • Designing cutting-edge workflow and developing innovative AI biology methods for omics data analysis
A concise and self-contained introduction to causal inference, increasingly important in data science and machine learning. The mathematization of causality is a relatively recent development, and has become increasingly important in data science and machine learning. This book offers a self-contained and concise introduction to causal models and how to learn them from data. After explaining the need for causal models and discussing some of the principles underlying causal inference, the book teaches readers how to use causal models: how to compute intervention distributions, how to infer causal models from observational and interventional data, and how causal ideas could be exploited for classical machine learning problems. All of these topics are discussed first in terms of two variables and then in the more general multivariate case. The bivariate case turns out to be a particularly hard problem for causal learning because there are no conditional independences as used by classical methods for solving multivariate cases. The authors consider analyzing statistical asymmetries between cause and effect to be highly instructive, and they report on their decade of intensive research into this problem. The book is accessible to readers with a background in machine learning or statistics, and can be used in graduate courses or as a reference for researchers. The text includes code snippets that can be copied and pasted, exercises, and an appendix with a summary of the most important technical concepts.
Modern agriculture needs to have high production efficiency combined with a high quality of obtained products. This applies to both crop and livestock production. To meet these requirements, advanced methods of data analysis are more and more frequently used, including those derived from artificial intelligence methods. Artificial neural networks (ANNs) are one of the most popular tools of this kind. They are widely used in solving various classification and prediction tasks, for some time also in the broadly defined field of agriculture. They can form part of precision farming and decision support systems. Artificial neural networks can replace the classical methods of modelling many issues, and are one of the main alternatives to classical mathematical models. The spectrum of applications of artificial neural networks is very wide. For a long time now, researchers from all over the world have been using these tools to support agricultural production, making it more efficient and providing the highest-quality products possible.
PlantOmics: The Omics of Plant Science provides a comprehensive account of the latest trends and developments of omics technologies or approaches and their applications in plant science. Thirty chapters written by 90 experts from 15 countries are included in this state-of-the-art book. Each chapter describes one topic/omics such as: omics in model plants, spectroscopy for plants, next generation sequencing, functional genomics, cyto-metagenomics, epigenomics, miRNAomics, proteomics, metabolomics, glycomics, lipidomics, secretomics, phenomics, cytomics, physiomics, signalomics, thiolomics, organelle omics, micro morphomics, microbiomics, cryobionomics, nanotechnology, pharmacogenomics, and computational systems biology for plants. It provides up to date information, technologies, and their applications that can be adopted and applied easily for deeper understanding plant biology and therefore will be helpful in developing the strategy for generating cost-effective superior plants for various purposes. In the last chapter, the editors have proposed several new areas in plant omics that may be explored in order to develop an integrated meta-omics strategy to ensure the world and earth’s health and related issues. This book will be a valuable resource to students and researchers in the field of cutting-edge plant omics.
This superb volume provides a critical assessment of genomics tools and approaches for crop breeding. Volume 1 presents the status and availability of genomic resources and platforms, and also devises strategies and approaches for effectively exploiting genomics research. Volume 2 goes into detail on a number of case studies of several important crop and plant species that summarize both the achievements and limitations of genomics research for crop improvement.
This book presents selected papers from the 18th IEEE International Conference on Machine Learning and Applications (IEEE ICMLA 2019). It focuses on deep learning networks and their application in domains such as healthcare, security and threat detection, fault diagnosis and accident analysis, and robotic control in industrial environments, and highlights novel ways of using deep neural networks to solve real-world problems. Also offering insights into deep learning architectures and algorithms, it is an essential reference guide for academic researchers, professionals, software engineers in industry, and innovative product developers.
Application of Machine Learning in Smart Agriculture is the first book to present a multidisciplinary look at how technology can not only improve agricultural output, but the economic efficiency of that output as well. Through a global lens, the book approaches the subject from a technical perspective, providing important knowledge and insights for effective and efficient implementation and utilization of machine learning. As artificial intelligence techniques are being used to increase yield through optimal planting, fertilizing, irrigation, and harvesting, these are only part of the complex picture which must also take into account the economic investment and its optimized return. The performance of machine learning models improves over time as the various mathematical and statistical models are proven. Presented in three parts, Application of Machine Learning in Smart Agriculture looks at the fundamentals of smart agriculture; the economics of the technology in the agricultural marketplace; and a diverse representation of the tools and techniques currently available, and in development. This book is an important resource for advanced level students and professionals working with artificial intelligence, internet of things, technology and agricultural economics. - Addresses the technology of smart agriculture from a technical perspective - Reveals opportunities for technology to improve and enhance not only yield and quality, but the economic value of a food crop - Discusses physical instruments, simulations, sensors, and markets for machine learning in agriculture
Pan-genomics: Applications, Challenges, and Future Prospects covers current approaches, challenges and future prospects of pan-genomics. The book discusses bioinformatics tools and their applications and focuses on bacterial comparative genomics in order to leverage the development of precise drugs and treatments for specific organisms. The book is divided into three sections: the first, an "overview of pan-genomics and common approaches, brings the main concepts and current approaches on pan-genomics research; the second, "case studies in pan-genomics, thoroughly discusses twelve case, and the last, "current approaches and future prospects in pan-multiomics, encompasses the developments on omics studies to be applied on bacteria related studies. This book is a valuable source for bioinformaticians, genomics researchers and several members of biomedical field interested in understanding further bacterial organisms and their relationship to human health. - Covers the entire spectrum of pangenomics, highlighting the use of specific approaches, case studies and future perspectives - Discusses current bioinformatics tools and strategies for exploiting pangenomics data - Presents twelve case studies with different organisms in order to provide the audience with real examples of pangenomics applicability
A Biologist’s Guide to Artificial Intelligence: Building the Foundations of Artificial Intelligence and Machine Learning for Achieving Advancements in Life Sciences provides an overview of the basics of Artificial Intelligence for life science biologists. In 14 chapters/sections, readers will find an introduction to Artificial Intelligence from a biologist’s perspective, including coverage of AI in precision medicine, disease detection, and drug development. The book also gives insights into the AI techniques used in biology and the applications of AI in food, and in environmental, evolutionary, agricultural, and bioinformatic sciences. Final chapters cover ethical issues surrounding AI and the impact of AI on the future. This book covers an interdisciplinary area and is therefore is an important subject matter resource and reference for researchers in biology and students pursuing their degrees in all areas of Life Sciences. It is also a useful title for the industry sector and computer scientists who would gain a better understanding of the needs and requirements of biological sciences and thus better tune the algorithms. Helps biologists succeed in understanding the concepts of Artificial Intelligence and machine learning Equips with new data mining strategies an easy interface into the world of Artificial Intelligence Enables researchers to enhance their own sphere of researching Artificial Intelligence
This book is an advanced textbook and a reference book for the post-graduate plant-breeding students and the plant breeders. It consolidates fundamental concepts and also the latest advances in plant-breeding practices including development in crop genomics. It contains crop wise explanation on origin, reproduction, genetics of yield contributing traits, biotic and abiotic stresses, nutritional improvement and crop specific plant-breeding procedures and techniques. The chapters are planned to describe crop-focused breeding procedure for the major crop plants as per their economic importance. The recent developments in breeding of field crops have been reported. The recent progress made in mapping traits of economic importance has been critically reviewed for each crop. The progress made in markers assisted selected in few crops has been summarized. This book bridges the knowledge gap and bring to the researchers and students information on modern breeding tools for developing biotic and abiotic stress tolerant, climate resilient and micronutrient rich varieties of field crops. The chapters in book are contributed by experienced Plant Breeders.