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Membrane Computing studies models of computation (called P systems) inspired by the structure and functioning of a living cell, in particular by the role of membranes in compartmentalization of living cells. This handbook provides the necessary biological and formal background, in a state-of-the-art review of current research.
This Festschrift is in honor of Mario de Jesús Pérez-Jiménez, Professor in the Department of Computer Science of University of Seville, Spain, on the occasion of his 70th birthday. The title of this volume reflects both his main research area, viz., Natural Computing, and the guiding principle of his functioning: “once you choose to do something, enjoy doing it". The respect that Professor Mario de Jesús Pérez-Jiménez enjoys in the scientific community was well demonstrated by the enthusiastic response received to the request to contribute to this book. The contributions by more than 70 authors from 15 countries cover a wide spectrum of research areas and reflect well the broad range of research interests of Professor Mario de Jesús Pérez-Jiménez. The research areas presented in this Festschrift include membrane computing, spiking neural networks, phylogenetic networks, ant colonies optimization, workbench for biocomputing, reaction systems, entropy of computation, rewriting systems, and insertion-deletion systems.
This book constitutes revised selected papers from the 19th International Conference on Membrane Computing (CMC19), CMC 2018, which was held in Dresden, Germany, in September 2018. The 15 papers presented in this volume were carefully reviewed and selected from 20 submissions. The contributions aim to abstract computing ideas and models from the structure and the functioning of living cells, as well as from the way the cells are organized in tissues or higher order structures.
Neurons in the brain communicate by short electrical pulses, the so-called action potentials or spikes. How can we understand the process of spike generation? How can we understand information transmission by neurons? What happens if thousands of neurons are coupled together in a seemingly random network? How does the network connectivity determine the activity patterns? And, vice versa, how does the spike activity influence the connectivity pattern? These questions are addressed in this 2002 introduction to spiking neurons aimed at those taking courses in computational neuroscience, theoretical biology, biophysics, or neural networks. The approach will suit students of physics, mathematics, or computer science; it will also be useful for biologists who are interested in mathematical modelling. The text is enhanced by many worked examples and illustrations. There are no mathematical prerequisites beyond what the audience would meet as undergraduates: more advanced techniques are introduced in an elementary, concrete fashion when needed.
Membrane computing is an unconventional model of computation associated with a new computing paradigm. The field of membrane computing was initiated in 1998 by the author of this book; it is a branch of natural computing inspired by the structure and functioning of the living cell and devises distributed parallel computing models in the form of membrane systems. This book is the first monograph surveying the new field in a systematic and coherent way. It presents the central notions and results: the main classes of P systems, the main results about their computational power and efficiency, a complete bibliography, and a series of open problems and research topics.
The theoretical basis of membrane computing was established in the early 2000s with fundamental research into the computational power, complexity aspects and relationships with other (un)conventional computing paradigms. Although this core theoretical research has continued to grow rapidly and vigorously, another area of investigation has since been added, focusing on the applications of this model in many areas, most prominently in systems and synthetic biology, engineering optimization, power system fault diagnosis and mobile robot controller design. The further development of these applications and their broad adoption by other researchers, as well as the expansion of the membrane computing modelling paradigm to other applications, call for a set of robust, efficient, reliable and easy-to-use tools supporting the most significant membrane computing models. This work provides comprehensive descriptions of such tools, making it a valuable resource for anyone interested in membrane computing models.
Spiking neural networks (SNN) are biologically inspired computational models that represent and process information internally as trains of spikes. This monograph book presents the classical theory and applications of SNN, including original author’s contribution to the area. The book introduces for the first time not only deep learning and deep knowledge representation in the human brain and in brain-inspired SNN, but takes that further to develop new types of AI systems, called in the book brain-inspired AI (BI-AI). BI-AI systems are illustrated on: cognitive brain data, including EEG, fMRI and DTI; audio-visual data; brain-computer interfaces; personalized modelling in bio-neuroinformatics; multisensory streaming data modelling in finance, environment and ecology; data compression; neuromorphic hardware implementation. Future directions, such as the integration of multiple modalities, such as quantum-, molecular- and brain information processing, is presented in the last chapter. The book is a research book for postgraduate students, researchers and practitioners across wider areas, including computer and information sciences, engineering, applied mathematics, bio- and neurosciences.
This solid introduction uses the principles of physics and the tools of mathematics to approach fundamental questions of neuroscience.
Intended for neurobiologists with an interest in mathematical analysis of neural data as well as the growing number of physicists and mathematicians interested in information processing by "real" nervous systems, Spikes provides a self-contained review of relevant concepts in information theory and statistical decision theory.