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This contributed volume highlights two areas of fundamental interest in high-performance computing: core algorithms for important kernels and computationally demanding applications. The first few chapters explore algorithms, numerical techniques, and their parallel formulations for a variety of kernels that arise in applications. The rest of the volume focuses on state-of-the-art applications from diverse domains. By structuring the volume around these two areas, it presents a comprehensive view of the application landscape for high-performance computing, while also enabling readers to develop new applications using the kernels. Readers will learn how to choose the most suitable parallel algorithms for any given application, ensuring that theory and practicality are clearly connected. Applications using these techniques are illustrated in detail, including: Computational materials science and engineering Computational cardiovascular analysis Multiscale analysis of wind turbines and turbomachinery Weather forecasting Machine learning techniques Parallel Algorithms in Computational Science and Engineering will be an ideal reference for applied mathematicians, engineers, computer scientists, and other researchers who utilize high-performance computing in their work.
This book presents advances in high performance computing as well as advances accomplished using high performance computing. It contains a collection of papers presenting results achieved in the collaboration of scientists from computer science, mathematics, physics, and mechanical engineering. From science problems to mathematical algorithms and on to the effective implementation of these algorithms on massively parallel and cluster computers, the book presents state-of-the-art methods and technology, and exemplary results in these fields.
Numerical algorithms, modern programming techniques, and parallel computing are often taught serially across different courses and different textbooks. The need to integrate concepts and tools usually comes only in employment or in research - after the courses are concluded - forcing the student to synthesise what is perceived to be three independent subfields into one. This book provides a seamless approach to stimulate the student simultaneously through the eyes of multiple disciplines, leading to enhanced understanding of scientific computing as a whole. The book includes both basic as well as advanced topics and places equal emphasis on the discretization of partial differential equations and on solvers. Some of the advanced topics include wavelets, high-order methods, non-symmetric systems, and parallelization of sparse systems. The material covered is suited to students from engineering, computer science, physics and mathematics.
Motivation It is now possible to build powerful single-processor and multiprocessor systems and use them efficiently for data processing, which has seen an explosive ex pansion in many areas of computer science and engineering. One approach to meeting the performance requirements of the applications has been to utilize the most powerful single-processor system that is available. When such a system does not provide the performance requirements, pipelined and parallel process ing structures can be employed. The concept of parallel processing is a depar ture from sequential processing. In sequential computation one processor is in volved and performs one operation at a time. On the other hand, in parallel computation several processors cooperate to solve a problem, which reduces computing time because several operations can be carried out simultaneously. Using several processors that work together on a given computation illustrates a new paradigm in computer problem solving which is completely different from sequential processing. From the practical point of view, this provides sufficient justification to investigate the concept of parallel processing and related issues, such as parallel algorithms. Parallel processing involves utilizing several factors, such as parallel architectures, parallel algorithms, parallel programming lan guages and performance analysis, which are strongly interrelated. In general, four steps are involved in performing a computational problem in parallel. The first step is to understand the nature of computations in the specific application domain.
Parallel processing has been an enabling technology in scientific computing for more than 20 years. This book is the first in-depth discussion of parallel computing in 10 years; it reflects the mix of topics that mathematicians, computer scientists, and computational scientists focus on to make parallel processing effective for scientific problems. Presently, the impact of parallel processing on scientific computing varies greatly across disciplines, but it plays a vital role in most problem domains and is absolutely essential in many of them. Parallel Processing for Scientific Computing is divided into four parts: The first concerns performance modeling, analysis, and optimization; the second focuses on parallel algorithms and software for an array of problems common to many modeling and simulation applications; the third emphasizes tools and environments that can ease and enhance the process of application development; and the fourth provides a sampling of applications that require parallel computing for scaling to solve larger and realistic models that can advance science and engineering.
What does Google's management of billions of Web pages have in common with analysis of a genome with billions of nucleotides? Both apply methods that coordinate many processors to accomplish a single task. From mining genomes to the World Wide Web, from modeling financial markets to global weather patterns, parallel computing enables computations that would otherwise be impractical if not impossible with sequential approaches alone. Its fundamental role as an enabler of simulations and data analysis continues an advance in a wide range of application areas. Scientific Parallel Computing is the first textbook to integrate all the fundamentals of parallel computing in a single volume while also providing a basis for a deeper understanding of the subject. Designed for graduate and advanced undergraduate courses in the sciences and in engineering, computer science, and mathematics, it focuses on the three key areas of algorithms, architecture, languages, and their crucial synthesis in performance. The book's computational examples, whose math prerequisites are not beyond the level of advanced calculus, derive from a breadth of topics in scientific and engineering simulation and data analysis. The programming exercises presented early in the book are designed to bring students up to speed quickly, while the book later develops projects challenging enough to guide students toward research questions in the field. The new paradigm of cluster computing is fully addressed. A supporting web site provides access to all the codes and software mentioned in the book, and offers topical information on popular parallel computing systems. Integrates all the fundamentals of parallel computing essential for today's high-performance requirements Ideal for graduate and advanced undergraduate students in the sciences and in engineering, computer science, and mathematics Extensive programming and theoretical exercises enable students to write parallel codes quickly More challenging projects later in the book introduce research questions New paradigm of cluster computing fully addressed Supporting web site provides access to all the codes and software mentioned in the book
Parallel-Algorithms for Regular Architectures is the first book to concentrate exclusively on algorithms and paradigms for programming parallel computers such as the hypercube, mesh, pyramid, and mesh-of-trees.
Our aim in this book is to present and enlarge upon those aspects of parallel computing that are needed by practitioners of computational science. Today al most all classical sciences, such as mathematics, physics, chemistry and biology, employ numerical methods to help gain insight into nature. In addition to the traditional numerical methods, such as matrix inversions and the like, a whole new field of computational techniques has come to assume central importance, namely the numerical simulation methods. These methods are much less fully developed than those which are usually taught in a standard numerical math ematics course. However, they form a whole new set of tools for research in the physical sciences and are applicable to a very wide range of problems. At the same time there have been not only enormous strides forward in the speed and capability of computers but also dramatic new developments in computer architecture, and particularly in parallel computers. These improvements offer exciting prospects for computer studies of physical systems, and it is the new techniques and methods connected with such computer simulations that we seek to present in this book, particularly in the light of the possibilities opened up by parallel computers. It is clearly not possible at this early stage to write a definitive book on simulation methods and parallel computing.
Advancements in microprocessor architecture, interconnection technology, and software development have fueled rapid growth in parallel and distributed computing. However, this development is only of practical benefit if it is accompanied by progress in the design, analysis and programming of parallel algorithms. This concise textbook provides, in one place, three mainstream parallelization approaches, Open MPP, MPI and OpenCL, for multicore computers, interconnected computers and graphical processing units. An overview of practical parallel computing and principles will enable the reader to design efficient parallel programs for solving various computational problems on state-of-the-art personal computers and computing clusters. Topics covered range from parallel algorithms, programming tools, OpenMP, MPI and OpenCL, followed by experimental measurements of parallel programs’ run-times, and by engineering analysis of obtained results for improved parallel execution performances. Many examples and exercises support the exposition.
This text discusses the design and use of practical parallel algorithms for solving problems in a growing application area whose computational requirements are enormous - VLSI CAD applications.