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Together with early theoretical work in population genetics, the debate on sources of genetic makeup initiated by proponents of the neutral theory made a solid contribution to the spectacular growth in statistical methodologies for molecular evolution. Evolutionary Genomics: Statistical and Computational Methods is intended to bring together the more recent developments in the statistical methodology and the challenges that followed as a result of rapidly improving sequencing technologies. Presented by top scientists from a variety of disciplines, the collection includes a wide spectrum of articles encompassing theoretical works and hands-on tutorials, as well as many reviews with key biological insight. Volume 2 begins with phylogenomics and continues with in-depth coverage of natural selection, recombination, and genomic innovation. The remaining chapters treat topics of more recent interest, including population genomics, -omics studies, and computational issues related to the handling of large-scale genomic data. Written in the highly successful Methods in Molecular BiologyTM series format, this work provides the kind of advice on methodology and implementation that is crucial for getting ahead in genomic data analyses. Comprehensive and cutting-edge, Evolutionary Genomics: Statistical and Computational Methods is a treasure chest of state-of the-art methods to study genomic and omics data, certain to inspire both young and experienced readers to join the interdisciplinary field of evolutionary genomics.
"Chapter 1 focuses on some of the steps needed to increase the rate of growth in rice production especially for meeting the demands of population growth. Chapter 2 discusses the various conventional approaches used for rice improvement. Chapter 3 examines the role of SSR markers in breeding and improvement of rice. Following the finding that Microbispora are the dominant genus of Actinobacteria in rice (Oryza sativa L.) plants grown in a Vertisol soil from Yanco, NSW, Australia, the authors of Chapter 4 decided to test the hypothesis whether this observation was t rice cultivar- or soil-dependent. Four rice cultivars grown in four agricultural soils were subjected to comparative assessment of their root and shoot endophytic actinobacterial population diversity, employing a classical culture-dependent approach as well as 16S rRNA gene PCR T-RFLP as the culture-independent method. Chapter 5 focuses on many issues pertaining to the development of temperate and cold-tolerant rice varieties suitable for cultivation under irrigated conditions in Kashmir valley and the hills around it. We discuss the issues, the progress, and the way forward for rice research in this very significant Himalayan region where rice is a staple food. The last chapter deals with the present distribution of the pest, adult description, host plants, life history, ecology, its association with various plant pathogens, damage and effect on yield, natural enemies and management practices"--
This book aims to provide an overview of the challenges and available technologies to improve rice and provide a response to the challenge posed by increasing world population and the resultant food shortages. Nutritional aspects of rice products and omics and the molecular technologies currently being used are covered in depth. As a staple food for over 50% of the world ́s population, an estimated 9 billion people will need to be fed by 2050, and healthy and uncontaminated foods need to reach consumers in developed and developing countries.This makes quality beyond productivity incredibly important and is one of the overriding themes of this work. The Future of Rice Demand: Quality Beyond Productivity offers researchers a better understanding of the nutritional aspects of rice. Omics technologies applied to cereal grain quality have been scarce in the literature published to date, making this text an excellent single source for researchers in regions where rice is a major crop. The first section of the book focuses on the major aspects of the industrial processing of all rice types. Further sections look at contamination prevention and biofortification, special rice types, and omics and other molecular tools used in the mass production and processing of healthy rice products.
There are few more emotive, or important, crops in the world than rice – the staple food for a huge proportion of the world’s population. This volume presents the latest results of research in crop improvement as well as in molecular and cellular activities in rice. It consists of 26 chapters and is divided into the following four sections: Genome-wide and genome-based research; Signal transduction and development; Evolution and ecology; Improvement of rice.
Pollen, the plant structure most widely used by humans, is a key structure in plant reproduction giving rise to fruits and seeds. Moreover, the biotechnological use of pollen is of great importance for plant breeders since it allows to obtain varieties with better utilization and yield. In the first part, the successive steps of pollen development in the anther from floral induction to pollen germination and fertilization are thoroughly examined; the second part is devoted to pollen behaviour in vitro.
Gene Editing in Plants, Volume 149 aims to provide the reader with an up-to-date survey of cutting-edge research with gene editing tools and an overview of the implications of this research on the nutritional quality of fruits, vegetables and grains. New chapters in the updated volume include topics relating to Genome Engineering and Agriculture: Opportunities and Challenges, the Use of CRISPR/Cas9 for Crop Improvement in Maize and Soybean, the Use of Zinc-Finger Nucleases for Crop Improvement, Gene Editing in Polyploid Crops: Wheat, Camelina, Canola, Potato, Cotton, Peanut, Sugar Cane, and Citrus, and Gene Editing With TALEN and CRISPR/Cas in Rice. This ongoing serial contain contributions from leading scientists and researchers in the field of gene editing in plants who describe the results of their own research in this rapidly expanding area of science. - Shows the importance of revolutionary gene editing technology on plant biology research and its application to agricultural production - Provides insight into what may lie ahead in this rapidly expanding area of plant research and development - Contains contributions from major leaders in the field of plant gene editing
This book presents, in 26 chapters, the status quo in epigenomic profiling. It discusses how functional information can be indirectly inferred and describes the new approaches that promise functional answers, collectively referred to as epigenome editing. It highlights the latest important advances in our understanding of the functions of plant epigenomics and new technologies for the study of epigenomic marks and mechanisms in plants. Topics include the deposition or removal of chromatin modifications and histone variants, the role of epigenetics in development and response to environmental signals, natural variation and ecology, as well as applications for epigenetics in crop improvement. Discussing areas ranging from the complex regulation of stress and heterosis to the precise mechanisms of DNA and histone modifications, it presents breakthroughs in our understanding of complex phenotypic phenomena.
Plant Transcription Factors: Evolutionary, Structural and Functional Aspects is the only publication that provides a comprehensive compilation of plant transcription factor families and their complex roles in plant biology. While the majority of information about transcription factors is based on mammalian systems, this publication discusses plant transcription factors, including the important aspects and unifying themes to understanding transcription factors and the important roles of particular families in specific processes. - Provides an entry point for transcription factor literature - Offers compilation of information into one single resource for rapid consultation on different plant transcription factor features - Integrates the knowledge about different transcription factors, along with cross-referencing - Provides information on the unique aspects surrounding plant transcription factors