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Solve challenging and computationally intensive analytics problems by leveraging network science and graph algorithms Key Features Learn how to wrangle different types of datasets and analytics problems into networks Leverage graph theoretic algorithms to analyze data efficiently Apply the skills you gain to solve a variety of problems through case studies in Python Purchase of the print or Kindle book includes a free PDF eBook Book DescriptionWe are living in the age of big data, and scalable solutions are a necessity. Network science leverages the power of graph theory and flexible data structures to analyze big data at scale. This book guides you through the basics of network science, showing you how to wrangle different types of data (such as spatial and time series data) into network structures. You’ll be introduced to core tools from network science to analyze real-world case studies in Python. As you progress, you’ll find out how to predict fake news spread, track pricing patterns in local markets, forecast stock market crashes, and stop an epidemic spread. Later, you’ll learn about advanced techniques in network science, such as creating and querying graph databases, classifying datasets with graph neural networks (GNNs), and mining educational pathways for insights into student success. Case studies in the book will provide you with end-to-end examples of implementing what you learn in each chapter. By the end of this book, you’ll be well-equipped to wrangle your own datasets into network science problems and scale solutions with Python.What you will learn Transform different data types, such as spatial data, into network formats Explore common network science tools in Python Discover how geometry impacts spreading processes on networks Implement machine learning algorithms on network data features Build and query graph databases Explore new frontiers in network science such as quantum algorithms Who this book is for If you’re a researcher or industry professional analyzing data and are curious about network science approaches to data, this book is for you. To get the most out of the book, basic knowledge of Python, including pandas and NumPy, as well as some experience working with datasets is required. This book is also ideal for anyone interested in network science and learning how graph algorithms are used to solve science and engineering problems. R programmers may also find this book helpful as many algorithms also have R implementations.
Discover how graph algorithms can help you leverage the relationships within your data to develop more intelligent solutions and enhance your machine learning models. You’ll learn how graph analytics are uniquely suited to unfold complex structures and reveal difficult-to-find patterns lurking in your data. Whether you are trying to build dynamic network models or forecast real-world behavior, this book illustrates how graph algorithms deliver value—from finding vulnerabilities and bottlenecks to detecting communities and improving machine learning predictions. This practical book walks you through hands-on examples of how to use graph algorithms in Apache Spark and Neo4j—two of the most common choices for graph analytics. Also included: sample code and tips for over 20 practical graph algorithms that cover optimal pathfinding, importance through centrality, and community detection. Learn how graph analytics vary from conventional statistical analysis Understand how classic graph algorithms work, and how they are applied Get guidance on which algorithms to use for different types of questions Explore algorithm examples with working code and sample datasets from Spark and Neo4j See how connected feature extraction can increase machine learning accuracy and precision Walk through creating an ML workflow for link prediction combining Neo4j and Spark
The second edition of this popular book presents the theory of graphs from an algorithmic viewpoint. The authors present the graph theory in a rigorous, but informal style and cover most of the main areas of graph theory. The ideas of surface topology are presented from an intuitive point of view. We have also included a discussion on linear programming that emphasizes problems in graph theory. The text is suitable for students in computer science or mathematics programs. ?
Graph algorithms is a well-established subject in mathematics and computer science. Beyond classical application fields, such as approximation, combinatorial optimization, graphics, and operations research, graph algorithms have recently attracted increased attention from computational molecular biology and computational chemistry. Centered around the fundamental issue of graph isomorphism, this text goes beyond classical graph problems of shortest paths, spanning trees, flows in networks, and matchings in bipartite graphs. Advanced algorithmic results and techniques of practical relevance are presented in a coherent and consolidated way. This book introduces graph algorithms on an intuitive basis followed by a detailed exposition in a literate programming style, with correctness proofs as well as worst-case analyses. Furthermore, full C++ implementations of all algorithms presented are given using the LEDA library of efficient data structures and algorithms.
This textbook discusses the design and implementation of basic algebraic graph algorithms, and algebraic graph algorithms for complex networks, employing matroids whenever possible. The text describes the design of a simple parallel matrix algorithm kernel that can be used for parallel processing of algebraic graph algorithms. Example code is presented in pseudocode, together with case studies in Python and MPI. The text assumes readers have a background in graph theory and/or graph algorithms.
In graph-based structural pattern recognition, the idea is to transform patterns into graphs and perform the analysis and recognition of patterns in the graph domain ? commonly referred to as graph matching. A large number of methods for graph matching have been proposed. Graph edit distance, for instance, defines the dissimilarity of two graphs by the amount of distortion that is needed to transform one graph into the other and is considered one of the most flexible methods for error-tolerant graph matching.This book focuses on graph kernel functions that are highly tolerant towards structural errors. The basic idea is to incorporate concepts from graph edit distance into kernel functions, thus combining the flexibility of edit distance-based graph matching with the power of kernel machines for pattern recognition. The authors introduce a collection of novel graph kernels related to edit distance, including diffusion kernels, convolution kernels, and random walk kernels. From an experimental evaluation of a semi-artificial line drawing data set and four real-world data sets consisting of pictures, microscopic images, fingerprints, and molecules, the authors demonstrate that some of the kernel functions in conjunction with support vector machines significantly outperform traditional edit distance-based nearest-neighbor classifiers, both in terms of classification accuracy and running time.
This book delivers a comprehensive and insightful account of applying mathematical modelling approaches to very large biological systems and networks—a fundamental aspect of computational systems biology. The book covers key modelling paradigms in detail, while at the same time retaining a simplicity that will appeal to those from less quantitative fields. Key Features: A hands-on approach to modelling Covers a broad spectrum of modelling, from static networks to dynamic models and constraint-based models Thoughtful exercises to test and enable understanding of concepts State-of-the-art chapters on exciting new developments, like community modelling and biological circuit design Emphasis on coding and software tools for systems biology Companion website featuring lecture videos, figure slides, codes, supplementary exercises, further reading, and appendices: https://ramanlab.github.io/SysBioBook/ An Introduction to Computational Systems Biology: Systems-Level Modelling of Cellular Networks is highly multi-disciplinary and will appeal to biologists, engineers, computer scientists, mathematicians and others.
This book discusses many modern, cutting-edge applications of graph theory, such as traffic networks and Braess' paradox, navigable networks and optimal routing for emergency response, backbone/dominating sets in wireless sensor networks, placement of electric vehicle charging stations, pedestrian safety and graph-theoretic methods in molecular epidemiology. Because of the rapid growth of research in this field, the focus of the book is on the up-to-date development of the aforementioned applications. The book will be ideal for researchers, engineers, transport planners and emergency response specialists who are interested in the recent development of graph theory applications. Moreover, this book can be used as teaching material for postgraduate students because, in addition to up-to-date descriptions of the applications, it includes exercises and their solutions. Some of the exercises mimic practical, real-life situations. Advanced students in graph theory, computer science or molecular epidemiology may use the problems and research methods presented in this book to develop their final-year projects, master's theses or doctoral dissertations; however, to use the information effectively, special knowledge of graph theory would be required.
Python Algorithms, Second Edition explains the Python approach to algorithm analysis and design. Written by Magnus Lie Hetland, author of Beginning Python, this book is sharply focused on classical algorithms, but it also gives a solid understanding of fundamental algorithmic problem-solving techniques. The book deals with some of the most important and challenging areas of programming and computer science in a highly readable manner. It covers both algorithmic theory and programming practice, demonstrating how theory is reflected in real Python programs. Well-known algorithms and data structures that are built into the Python language are explained, and the user is shown how to implement and evaluate others.
Master Python and elevate your algorithmic skills with this comprehensive course. From introductory concepts to advanced computational problems, learn how to efficiently solve complex challenges and optimize your code. Key Features Comprehensive introduction to Python programming and algorithms Detailed exploration of data structures and sorting/searching techniques Advanced topics including graph algorithms and computational problem-solving Book DescriptionBegin your journey with an introduction to Python and algorithms, laying the groundwork for more complex topics. You will start with the basics of Python programming, ensuring a solid foundation before diving into more advanced and sophisticated concepts. As you progress, you'll explore elementary data containers, gaining an understanding of their role in algorithm development. Midway through the course, you’ll delve into the art of sorting and searching, mastering techniques that are crucial for efficient data handling. You will then venture into hierarchical data structures, such as trees and graphs, which are essential for understanding complex data relationships. By mastering algorithmic techniques, you’ll learn how to implement solutions for a variety of computational challenges. The latter part of the course focuses on advanced topics, including network algorithms, string and pattern deciphering, and advanced computational problems. You'll apply your knowledge through practical case studies and optimizations, bridging the gap between theoretical concepts and real-world applications. This comprehensive approach ensures you are well-prepared to handle any programming challenge with confidence.What you will learn Master sorting and searching algorithms Implement hierarchical data structures like trees and graphs Apply advanced algorithmic techniques to solve complex problems Optimize code for efficiency and performance Understand and implement advanced graph algorithms Translate theoretical concepts into practical, real-world solutions Who this book is for This course is designed for a diverse group of learners, including technical professionals, software developers, computer science students, and data enthusiasts. It caters to individuals who have a basic understanding of programming and are eager to deepen their knowledge of Python and algorithms. Whether you're a recent graduate, or an experienced developer looking to expand your skill set, this course is tailored to meet the needs of all types of audiences. Ideal for those aiming to strengthen their algorithmic thinking and improve their coding efficiency.