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This volume features the complete text of the material presented at the Nineteenth Annual Conference of the Cognitive Science Society. Papers have been loosely grouped by topic and an author index is provided in the back. As in previous years, the symposium included an interesting mixture of papers on many topics from researchers with diverse backgrounds and different goals, presenting a multifaceted view of cognitive science. In hopes of facilitating searches of this work, an electronic index on the Internet's World Wide Web is provided. Titles, authors, and summaries of all the papers published here have been placed in an online database which may be freely searched by anyone. You can reach the web site at: www-csli.stanford.edu/cogsci97.
The 11th International Symposium on Graph Drawing (GD 2003) was held on September 21–24, 2003, at the Universit` a degli Studi di Perugia, Perugia, Italy. GD 2003 attracted 93 participants from academic and industrial institutions in 17 countries. In response to the call for papers, the program committee received 88 re- larsubmissionsdescribingoriginalresearchand/orsystemdemonstrations.Each submission was reviewed by at least 4 program committee members and c- ments were returned to the authors. Following extensive e-mail discussions, the program committee accepted 34 long papers (12 pages each in the proceedings) and 11 short papers (6 pages each in the proceedings). Also, 6 posters (2 pages each in the proceedings) were displayed in the conference poster gallery. In addition to the 88 submissions, the program committee also received a submission of special type, one that was not competing with the others for a time slot in the conference program and that collects selected open problems in graph drawing. The aim of this paper, which was refereed with particular care andUNCHANGEDtworoundsofrevisions,istostimulatefutureresearchinthe graph drawing community. The paper presents 42 challenging open problems in di?erentareasofgraphdrawingandcontainsmorethan120references.Although the length of the paper makes it closer to a journal version than to a conference extended abstract, we decided to include it in the conference proceedings so that it could easily reach in a short time the vast majority of the graph drawing community.
An introduction to biological networks and methods for their analysis Analysis of Biological Networks is the first book of its kind to provide readers with a comprehensive introduction to the structural analysis of biological networks at the interface of biology and computer science. The book begins with a brief overview of biological networks and graph theory/graph algorithms and goes on to explore: global network properties, network centralities, network motifs, network clustering, Petri nets, signal transduction and gene regulation networks, protein interaction networks, metabolic networks, phylogenetic networks, ecological networks, and correlation networks. Analysis of Biological Networks is a self-contained introduction to this important research topic, assumes no expert knowledge in computer science or biology, and is accessible to professionals and students alike. Each chapter concludes with a summary of main points and with exercises for readers to test their understanding of the material presented. Additionally, an FTP site with links to author-provided data for the book is available for deeper study. This book is suitable as a resource for researchers in computer science, biology, bioinformatics, advanced biochemistry, and the life sciences, and also serves as an ideal reference text for graduate-level courses in bioinformatics and biological research.
The global environment is changing rapidly under the impact of human activities. An important element in this change is related to global climate modification. Experts from the natural and social sciences with a strong interest in history discussed common topics of great interest to society. Can the study of climate and history help in devising strategies for coping with this change? What might be the type of information most useful in this context? What are the pitfalls awaiting the unwary? These and similar questions were discussed during a four-day workshop. The resulting proceedings contain comprehensive papers of broad interest, thematic back-ground papers and reports of study groups. Apart from scientists, the papers should interest graduate students and lecturers.
This book is a collection of talks presented at the Third International Conference on Bioinformatics and Genome Research, June 1-4, 1994, at Tallahassee Conference Center. Topics include: database management, genome rearrangement, molecular informatics of HIV, gene regulation and metabolism, nucleic and protein sequence research, understanding of genetic data through graphic displays, tools and techniques for genome analyses and a panel discussion of technology transfer.
This volume contains the papers presented at the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2005), which was held in Cambridge, Massachusetts, on May 14–18, 2005. The RECOMB conference series was started in 1997 by Sorin Istrail, Pavel Pevzner and Michael Waterman. The list of previous meetings is shown below in the s- tion “Previous RECOMB Meetings. ” RECOMB 2005 was hosted by the Broad Institute of MIT and Harvard, and Boston University’s Center for Advanced - nomic Technology, and was excellently organized by the Organizing Committee Co-chairs Jill Mesirov and Simon Kasif. This year, 217 papers were submitted, of which the Program Committee - lected 39 for presentation at the meeting and inclusion in this proceedings. Each submission was refereed by at least three members of the Program Committee. After the completion of the referees’ reports, an extensive Web-based discussion took place for making decisions. From RECOMB 2005, the Steering Committee decided to publish the proceedings as a volume of Lecture Notes in Bioinf- matics (LNBI) for which the founders of RECOMB are also the editors. The prominent volume number LNBI 3500 was assigned to this proceedings. The RECOMB conference series is closely associated with the Journal of Compu- tional Biology which traditionally publishes special issues devoted to presenting full versions of selected conference papers. The RECOMB Program Committee consistedof42members,aslistedonaseparatepage. Iwouldliketothank the RECOMB 2005 Program Committee members for their dedication and hard work.
This volume provides technical insight on how genomics-oriented studies may be used to bring new understanding to established models of fungal development. The book helps to assess and solve problems associated with multiple copies of genes and proteins with seemingly identical functions and depicts various industrial applications. To bridge the in