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This collection of articles, developed in association with the EU funded ViBRANT project, illustrates how advances to research infrastructures are reciprocally changing the practice of taxonomy. A detailed review of data issues in the life sciences (Thessen and Patterson 2011) sets the tone for subsequent articles in this special issue, whose contributions broadly fall into three categories. Theÿ initial articles consider some of the major infrastructure platforms that support the production and management of biodiversity data. These include the EDIT Platform for Cybertaxonomy, Wiki-based approaches including BioWikiFarm and the Scratchpads Virtual Research Environment. Later articles provide deeper coverage of specialist areas of interest to taxonomic and biodiversity researchers. The topics covered include the mark-up (Penev et al. 2011) and management (King et al. 2011) of taxonomic literature, geospatial assessment of species distributions (Bachman et al. 2011) and licensing issues specific to life science data (Hagedorn et al. 2011). Finally, the special issue closes with a series of research and review papers that provide detailed use cases illustrating how these research infrastructures are being put into practice. Highlights from this section include citizen science approaches to collecting species information by the COMBER Marine observation network (Arvanitidis et al. 2011) and the Australian Bush Blitz programme (Lambkin and Bartlett 2011); use of new tools for data publishing like the Global Biodiversity Information Facility (GBIF) Integrated Publishing Toolkit (IPT) and the DRYAD Data Repository; new forms of publication via ?data papers? that allow checklists and identification keys to be formally published as structured datasets (e.g., Narwade et al. 2011); and finally new taxonomic revisions and species descriptions constructed from within the collaborative systems like XPER2 and Scratchpads.
Research and scholarly communication is increasingly seen in the light of open science, making research processes and results more accessible and collaborative. This brings with it the chance to better connect research and society by introducing new avenues for engagement with citizens. This book presents the proceedings of the 19th International Conference on Electronic Publishing (Elpub), held in Valetta, Malta, in September 2015. This year’s conference explores the interplay of two dimensions of electronic publishing – the ever growing volume of digital collections and the improved understanding of the widest user group, citizens. This exciting theme encompasses human, cultural, economic, social, technological, legal, policy-related, commercial, and other relevant aspects. Echoing the conference agenda, the book covers a wide range of topics, including engagement with citizens and professionals, enhanced publishing and new paradigms, discovery and digital libraries, open access and open science, as well as the use and reuse of data. Addressing the most recent developments in these areas, the book will be of interest to practitioners, researchers and students in information science, as well as users of electronic publishing.
The Extended Specimen highlights the research potential for ornithological specimens, and is meant to encourage ornithologists poised to initiate a renaissance in collections-based ornithological research. Contributors illustrate how collections and specimens are used in novel ways by adopting emerging new technologies and analytical techniques. Case studies use museum specimens and emerging and non-traditional types of specimens, which are developing new methods for making biological collections more accessible and "usable" for ornithological researchers. Published in collaboration with and on behalf of The American Ornithological Society, this volume in the highly-regarded Studies in Avian Biology series documents the power of ornithological collections to address key research questions of global importance.
The growth of electronic publishing of literature has created new challenges, such as the need for mechanisms for citing online references in ways that can assure discoverability and retrieval for many years into the future. The growth in online datasets presents related, yet more complex challenges. It depends upon the ability to reliably identify, locate, access, interpret, and verify the version, integrity, and provenance of digital datasets. Data citation standards and good practices can form the basis for increased incentives, recognition, and rewards for scientific data activities that in many cases are currently lacking in many fields of research. The rapidly-expanding universe of online digital data holds the promise of allowing peer-examination and review of conclusions or analysis based on experimental or observational data, the integration of data into new forms of scholarly publishing, and the ability for subsequent users to make new and unforeseen uses and analyses of the same data-either in isolation, or in combination with, other datasets. The problem of citing online data is complicated by the lack of established practices for referring to portions or subsets of data. There are a number of initiatives in different organizations, countries, and disciplines already underway. An important set of technical and policy approaches have already been launched by the U.S. National Information Standards Organization (NISO) and other standards bodies regarding persistent identifiers and online linking. The workshop summarized in For Attribution-Developing Data Attribution and Citation Practices and Standards: Summary of an International Workshop was organized by a steering committee under the National Research Council's (NRC's) Board on Research Data and Information, in collaboration with an international CODATA-ICSTI Task Group on Data Citation Standards and Practices. The purpose of the symposium was to examine a number of key issues related to data identification, attribution, citation, and linking to help coordinate activities in this area internationally, and to promote common practices and standards in the scientific community.