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Microbes catalyze countless chemical reactions in nature which control the chemistry of the environment. Aquatic Geomicrobiology looks at these reactions and their effect on the aquatic environments from the perspective of the microbes involved. The volume begins with three introductory chapters outlining the basic principles of microbial systematics, microbial ecology, and chemical thermodynamics. These provide a framework for exploring the microbial control of elemental cycling in the remaining chapters. Readers will learn how microbes control the cycling of elements, the structure of the microbial ecosystems involved, and what environmental factors influence the activities of microbial populations. Also available in hardback Written by international experts in the microbial ecology and biogeochemistry of aquatic systems Includes introductory chapters on microbial systematics, principles of microbial ecology, and chemical thermodynamics Contains over 1500 references
Igneous oceanic crust is one of the largest potential habitats for life on earth, and microbial activity supported by rock-water-microbe reactions in this environment can impact global biogeochemical cycles. However, our understanding of the microbiology of this system, especially the subsurface “deep biosphere” component of it, has traditionally been limited by sample availability and quality. Over the past decade, several major international programs (such as the Center for Dark Energy Biosphere Investigations, the current International Ocean Discovery Program and its predecessor Integrated Ocean Drilling Program, and the Deep Carbon Observatory) have focused on advancing our understanding of life in this cryptic, yet globally relevant, biosphere. Additionally, many field and laboratory research programs are examining hydrothermal vent systems –a seafloor expression of seawater that has been thermally and chemically altered in subseafloor crust – and the microbial communities supported by these mineral-rich fluids. The Frontiers in Microbiology 3 September 2017 | Recent Advances in Geomicrobiology of the Ocean Crust papers in this special issue bring together recent discoveries of microbial presence, diversity and activity in these dynamic ocean environments. Cumulatively, the articles in this special issue serve as a tribute to the late Dr. Katrina J. Edwards, who was a pioneer and profound champion of studying microbes that “rust the crust”. This special issue volume serves as a foundation for the continued exploration of the subsurface ocean crust deep biosphere.
Uncovers the Key Role Microbes Play in the Transformation of Oxidizable and Reducible MineralsMany areas of geomicrobial processes are receiving serious attention from microbiologists, specifically the role microbes play in the formation and degradation of minerals and fossil fuels and elemental cycling. Most notably, the latest research finds that
Investigating Seafloors and Oceans: From Mud Volcanoes to Giant Squid offers a bottom-to-top tour of the world's oceans, exposing the secrets hidden therein from a variety of scientific perspectives. Opening with a discussion of the earth's formation, hot spots, ridges, plate tectonics, submarine trenches, and cold seeps, the text goes on to address such topics as the role of oceans in the origin of life, tidal bore, thermal effects, ecosystem services, marine creatures, and nutraceutical and pharmaceutical resources. This unique reference provides insight into a wide array of questions that researchers continue to ask about the vast study of oceans and the seafloor. It is a one-of-a-kind examination of oceans that offers important perspectives for researchers, practitioners, and academics in all marine-related fields. - Includes chapters addressing various scientific disciplines, offering the opportunity for readers to gain insights on diverse topics in the study of oceans - Provides scientific discussion on thermo-tolerant microbial life in sub-seafloor hot sediments and vent fields, as well as the origin of life debates and the puzzles revolving around how life originated - Includes detailed information on the origin of dreaded episodes, such as volcanic eruptions, earthquakes, tsunamis, internal waves and tidal bores - Contains information on the contribution of the oceans in terms of providing useful nutraceutical and pharmaceutical products
1. THE BEGINNINGS OF HYDRATE RESEARCH Until very recently, our understanding of hydrate in the natural environment and its impact on seafloor stability, its importance as a sequester of methane, and its potential as an important mechanism in the Earth's climate change system, was masked by our lack of appreciation of the vastness of the hydrate resource. Only a few publications on naturally occurring hydrate existed prior to 1975. The first published reference to oceanic gas hydrate (Bryan and Markl, 1966) and the first publication in the scientific literature (Stoll, et a1., 1971) show how recently it has been since the topic of naturally occurring hydrate has been raised. Recently, however, the number of hydrate publications has increased substantially, reflecting increased research into hydrate topics and the initiation of funding to support the researchers. Awareness of the existence of naturally occurring gas hydrate now has spread beyond the few scientific enthusiasts who pursued knowledge about the elusive hydrate because of simple interest and lurking suspicions that hydrate would prove to be an important topic. The first national conference on gas hydrate in the U.S. was held as recently as April, 1991 at the U.S. National Center of the U.s. Geological Survey in Reston Virginia (Max et al., 1991). The meeting was co-hosted by the U.s. Geological Survey, the Naval Research Laboratory, and the U.S.
A summary of the latest research in this field. The topics comprise the sedimentological examination and physical properties of the sedimentary solid phase, pore water and pore water constituents, organic matter as the driving force of most microbiological processes, biotic and abiotic redox reactions, carbonates and stable isotopes as proxies for paleoclimate reconstruction, metal enrichments in ferromanganese nodules and crusts as well as in hot vents and cold seeps on the seafloor. The current model conceptions lead to the development of different types of computer models, allowing the global mass exchanges between oceans and sediments to be balanced.
The oceans cover 70% of the Earth’s surface, and are critical components of Earth’s climate system. This new edition of Encyclopedia of Ocean Sciences, Six Volume Set summarizes the breadth of knowledge about them, providing revised, up to date entries as well coverage of new topics in the field. New and expanded sections include microbial ecology, high latitude systems and the cryosphere, climate and climate change, hydrothermal and cold seep systems. The structure of the work provides a modern presentation of the field, reflecting the input and different perspective of chemical, physical and biological oceanography, the specialized area of expertise of each of the three Editors-in-Chief. In this framework maximum attention has been devoted to making this an organic and unified reference. Represents a one-stop. organic information resource on the breadth of ocean science research Reflects the input and different perspective of chemical, physical and biological oceanography, the specialized area of expertise of each of the three Editors-in-Chief New and expanded sections include microbial ecology, high latitude systems and climate change Provides scientifically reliable information at a foundational level, making this work a resource for students as well as active researches
This book, first published in 2004, reviews the subject of the nature, causes, and consequences of fluid flow in oceanic crust.
Deep subsurface microbiology is a highly active and rapidly advancing research field at the interface of microbiology and the geosciences; it focuses on the detection, identification, quantification, cultivation and activity measurements of bacteria, archaea and eukaryotes that permeate the subsurface biosphere of deep marine sediments and the basaltic ocean and continental crust. The deep subsurface biosphere abounds with uncultured, only recently discovered and – at best - incompletely understood microbial populations. In spatial extent and volume, Earth's subsurface biosphere is only rivaled by the deep sea water column. So far, no deep subsurface sediment has been found that is entirely devoid of microbial life; microbial cells and DNA remain detectable at sediment depths of more than 1 km; microbial life permeates deeply buried hydrocarbon reservoirs, and is also found several kilometers down in continental crust aquifers. Severe energy limitation, either as electron acceptor or donor shortage, and scarcity of microbially degradable organic carbon sources are among the evolutionary pressures that have shaped the genomic and physiological repertoire of the deep subsurface biosphere. Its biogeochemical role as long-term organic carbon repository, inorganic electron and energy source, and subduction recycling engine continues to be explored by current research at the interface of microbiology, geochemistry and biosphere/geosphere evolution. This Research Topic addresses some of the central research questions about deep subsurface microbiology and biogeochemistry: phylogenetic and physiological microbial diversity in the deep subsurface; microbial activity and survival strategies in severely energy-limited subsurface habitats; microbial activity as reflected in process rates and gene expression patterns; biogeographic isolation and connectivity in deep subsurface microbial communities; the ecological standing of subsurface biospheres in comparison to the surface biosphere – an independently flourishing biosphere, or mere survivors that tolerate burial (along with organic carbon compounds), or a combination of both? Advancing these questions on Earth’s deep subsurface biosphere redefines the habitat range, environmental tolerance, activity and diversity of microbial life.
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