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Western Oregon is home to native Rhododendron species and is the center for cultivated Rhododendron production in the United States. These Rhododendron spp. are known to be infected with fungal endophytes. However, the community structure of these endophytes in native and cultivated Rhododendron is poorly understood. Our study targeted the foliar fungal endophyte communities of two native Rhododendron spp. and two non-native commercially cultivated Rhododendron varieties. Parallel culturedependent (fungal isolation and identification based on ITS sequencing) and cultureindependent sequencing approaches (metagenomic sequencing of the ITS region using 454 pyrosequencing) were employed, and results provided evidence of distinctly different community structure in each host species. Additionally, results indicated higher diversity among cultivated and nursery grown Rhododendron. This suggests that the close proximity of the nurseries sampled to the forest environment allows exposure to two distinct sources of endophyte infection. Together, our results show the importance of host identity and environment in structuring the associated endophyte communities.
A constant research effort to understand plant-microbe interactions makes it indispensable to keep abreast of the latest research developments. Researchers from a range of disciplines have used multiple approaches to infer this field. With the advent of next-generation techniques, both molecular and computational, the field has entered a new phase. These approaches often result in massive information, which is sometimes tangled and in need of further analysis. These types of analyses also require cutting-edge data analytics as well as efficient statistical models. Plant-Microbe Interactions: Harnessing Next-Generation Molecular Technologies for Sustainable Agriculture provides a comprehensive picture of the modern-day analytics and approaches being used to provide insights into the interactions between plant and microbe. A wide range of technologies are explored along with practical guides toward these techniques. A detailed understanding of omics data in various areas could be obtained from this compilation. Key Features: • Crosstalk between plant and microbe • Overview of advanced molecular techniques used to study plant-microbe interaction • Practical guide to technologies such as NGS • Omics data analysis used to study plant-microbe interaction • Role of soil metagenomics • Advanced technologies such as nanotechnology and CRISPR serving to study plant-microbe interaction This book will serve as a great reference to various next-generation techniques in the field of plant-microbe interaction, thereby helping to better understand the mechanism. This will also help budding researchers to shape their research in similar areas.
This book is a printed edition of the Special Issue "Fungal Endophytes in Plants" that was published in JoF
Latent infection vs. endophytic colonization by fungi; Isolation and analysis of endophytic fungal communities from woody plants; Fungal endophytes of living branch bases in several european tree species; Ecological and physiological aspects of host specificity in endophytic fungi; Coastal redwood leaf endophytes: their occurrence, interactions and response to host volatile terpenoids; Fungal endophytes of palms; Morphological and physiological adaptation of balansieae and trends in the evolution of grass endophytes.
Endophytes are commonly known as microorganisms, mainly bacteria and fungi, which live inside plant tissues without inducing symptoms. Considering the long-lived trees, endophytes have a fundamental role in preparing their hosts to face extreme weather conditions, drought, heat, cold, and pathogen and herbivore attacks. The current knowledge clearly demonstrates the importance of endophytes in shaping the plant diversity in a forest. Endophytes have an important capacity for biocontrol of forest diseases. Considering endophyte diversity and the range of various compounds and enzymes they can produce, endophytes can be used for various biotechnological applications.
This book discusses the latest developments in our understanding of microbial endophytes, their ecology, diversity and potential biotechnological applications. It covers all the latest advances concerning the endophytic interaction of microorganisms in a wide array of plants, reported on by experts from the entire globe. The diverse microbial community, which consists of archaeal, bacterial, fungal and protistic taxa, can be found in all plants. The endophytic lifecycle reveals how microorganisms play essential roles in plant growth, fitness and diversification. Diversity is an integral component of ecology. In soil ecology, below-ground interactions of plant and microorganisms are accomplished by endophytes, which reside in the plant’s internal tissues. The microbial world in general and endophytes in particular reflect a unique degree of genetic and functional (metabolic) diversity. Currently, significant attention is being paid to endophytic microorganisms, as their repertoire of cells and metabolites hold immense potential with regard to biotechnological applications for sustainable development. The diversity of bacterial endophytes guarantees that there are endophytes capable of forming compatible associations with all agronomically important plants, including monocots and dicots. The study of endophytes’ diverse nature in connection with biodiesel, medicinal and agriculturally important crop can lead to a better understanding of applicable facets. The topics in this dynamic field of study are so diverse and vast. This volume will benefit all botanists, microbiologists, ecologists, plant pathologists, physiologists, agronomists, molecular biologists, environmentalists, policymakers, conservationists and NGOs working to protect species and prevent the loss of biologically significant genetic material.
This is the first book dedicated to the interactions of non-mycorrhizal microbial endophytes with plant roots. The phenotypes of these interactions can be extremely plastic, depending on environmental factors, nutritional status, genetic disposition and developmental stages of the two partners. This book explores diversity, life history strategies, interactions, applications in agriculture and forestry, methods for isolation, cultivation, and both conventional and molecular methods for identification and detection of these endophytes.
Plants are typically colonized by numerous endophyte species symbiotically without any noticeable disease symptoms. These microbes are abundant, diverse and play critical ecological roles across natural and agricultural ecosystems. Endophytes have attracted the attention of researchers due to their various beneficial effects on plants, especially in agricultural crop species. Genomic tools will enhance our understanding on the growth and nutrition requirements of this host-symbiont relationship. Recent advances in DNA sequencing technologies and bioinformatic pipelines have allowed analyzing the plant microbiome and host-endophyte interaction more effectively with limited bias. Furthermore, various studies have employed and utilized transcriptomic and genomic tools to understand the role of endophytes and their interaction with plant hosts. This electronic book covers various research articles highlighting the important developments on endophytes using transcriptomics, next generation sequencing and genomic tools.
This book describes the various therapeutic and commercial applications of compounds produced by endophytes. Endophytes are microorganisms that reside in the living internal tissues of plants without showing any apparent symptom of their presence. During their life cycle, they establish a symbiotic or parasitic relationship with the host plant. The book discusses different kinds of compounds that these endophytes produce, and their potential properties such as antimicrobial, anti-oxidative, anti-inflammatory, anticancer, neutraceutical, immunomodulatory etc. Other prospects of entophytic biology such as fungi of wild and domesticated crop plants and their applications in sustainable agriculture have also been included. The book also provides details about various techniques used in endophyte research, metabolite detection and bioactivity-based assays to explore endophytes. Endophytes with phytohormones‐producing potential and their role in plant —microbial interactions under stress are also discussed. The book also highlights novel strategies to tap into the hidden potential of endophytic fungi for the production of novel biomolecules using an integrated approach. These microorganisms have attracted a lot of scientific attention worldwide because of their huge potential for novel phytochemicals, pharmaceuticals and lead compounds. Hundreds of new novel endophytic fungi have been isolated, identified and systematically studied in last decade. However, this is the first of its kind, systematic compilation of potential biotechnological applications of endophytic compounds. Chapter contributions from groups across the globe make this book very up-to-date and informative. This book is very useful and interesting for students and researchers in the field of microbiology, plant sciences, mycology and pharmacology. It is also helpful for industry experts working on developing novel compounds.
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