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Creating New Medical Ontologies for Image Annotation focuses on the problem of the medical images automatic annotation process, which is solved in an original manner by the authors. All the steps of this process are described in detail with algorithms, experiments and results. The original algorithms proposed by authors are compared with other efficient similar algorithms. In addition, the authors treat the problem of creating ontologies in an automatic way, starting from Medical Subject Headings (MESH). They have presented some efficient and relevant annotation models and also the basics of the annotation model used by the proposed system: Cross Media Relevance Models. Based on a text query the system will retrieve the images that contain objects described by the keywords.
Creating New Medical Ontologies for Image Annotation focuses on the problem of the medical images automatic annotation process, which is solved in an original manner by the authors. All the steps of this process are described in detail with algorithms, experiments and results. The original algorithms proposed by authors are compared with other efficient similar algorithms. In addition, the authors treat the problem of creating ontologies in an automatic way, starting from Medical Subject Headings (MESH). They have presented some efficient and relevant annotation models and also the basics of the annotation model used by the proposed system: Cross Media Relevance Models. Based on a text query the system will retrieve the images that contain objects described by the keywords.
• Includes Text Mining and Natural Language Processing Methods for extracting information from electronic health records and biomedical literature. • Analyzes text analytic tools for new media such as online forums, social media posts, tweets and video sharing. • Demonstrates how to use speech and audio technologies for improving access to online content for the visually impaired. Text Mining of Web-Based Medical Content examines various approaches to deriving high quality information from online biomedical literature, electronic health records, query search terms, social media posts and tweets. Using some of the latest empirical methods of knowledge extraction, the authors show how online content, generated by both professionals and laypersons, can be mined for valuable information about disease processes, adverse drug reactions not captured during clinical trials, and tropical fever outbreaks. Additionally, the authors show how to perform infromation extraction on a hospital intranet, how to build a social media search engine to glean information about patients' own experiences interacting with healthcare professionals, and how to improve access to online health information. This volume provides a wealth of timely material for health informatic professionals and machine learning, data mining, and natural language researchers. Topics in this book include: • Mining Biomedical Literature and Clinical Narratives • Medication Information Extraction • Machine Learning Techniques for Mining Medical Search Queries • Detecting the Level of Personal Health Information Revealed in Social Media • Curating Layperson’s Personal Experiences with Health Care from Social Media and Twitter • Health Dialogue Systems for Improving Access to Online Content • Crowd-based Audio Clips to Improve Online Video Access for the Visually Impaired • Semantic-based Visual Information Retrieval for Mining Radiographic Image Data • Evaluating the Importance of Medical Terminology in YouTube Video Titles and Descriptions
This book contains a selection of articles from The 2015 World Conference on Information Systems and Technologies (WorldCIST'15), held between the 1st and 3rd of April in Funchal, Madeira, Portugal, a global forum for researchers and practitioners to present and discuss recent results and innovations, current trends, professional experiences and challenges of modern Information Systems and Technologies research, technological development and applications. The main topics covered are: Information and Knowledge Management; Organizational Models and Information Systems; Intelligent and Decision Support Systems; Big Data Analytics and Applications; Software Systems, Architectures, Applications and Tools; Multimedia Systems and Applications; Computer Networks, Mobility and Pervasive Systems; Human-Computer Interaction; Health Informatics; Information Technologies in Education; Information Technologies in Radio communications.
Querying efficiently images using an image retrieval system is a long standing and challenging research problem.In the medical domain, images are increasingly produced in large quantities due their increasing interests for many medical practices such as diagnosis, report writing and teaching. This thesis proposes a semantic-based gastroenterological images annotation and retrieval system based on a new polyp ontology that can be used to support physicians to decide how to deal with a polyp. The proposed solution uses a polyp ontology and rests on an adaptation of standard reasonings in description logic to enable semi automatic construction of queries and image annotation.A second contribution of this work lies in the proposition of a new approach for computing relaxed answers of ontological queries based on a notion of an edit distance of a given individual w.r.t. a given query. Such a distance is computed by counting the number of elementary operations needed to be applied to an ABox in order to make a given individual a correct answer to a given query. The considered elementary operations are adding to or removing from an ABox, assertions on atomic concept, a negation of an atomic concept or an atomic role. The thesis proposes several formal semantics for such query approximation and investigates the underlying decision and optimisation problems.
The book Intelligent Systems in Science and Information 2014 is the carefully edited collection of 25 extended chapters from selected papers in the field of Computational Intelligence that , which received highly recommended feedback during the Science and Information Conference (SAI) 2014 review process. All chapters have gone through substantial extension and consolidation and were subject to another round of rigorous review and additional modification and represent the state of the art of the cutting-edge research and technologies in the related areas.
This book constitutes the proceedings of the 7th Iberian Conference on Pattern Recognition and Image Analysis, IbPRIA 2015, held in Santiage de Compostela, Spain, in June 2015. The 83 papers presented in this volume were carefully reviewed and selected from 141 submissions. They were organized in topical sections named: Pattern Recognition and Machine Learning; Computer Vision; Image and Signal Processing; Applications; Medical Image; Pattern Recognition and Machine Learning; Computer Vision; Image and Signal Processing; and Applications
This book constitutes the thoroughly refereed conference proceedings of the 5th International Workshop on Resource Discovery, RED 2010, co-located with the 9th Extended Semantic Web Conference, held in Heraklion, Greece, in May 2012. The 7 revised full papers presented were carefully reviewed and selected from 9 submissions. They deal with various issues related to resource discovery.
Microarray Image and Data Analysis: Theory and Practice is a compilation of the latest and greatest microarray image and data analysis methods from the multidisciplinary international research community. Delivering a detailed discussion of the biological aspects and applications of microarrays, the book: Describes the key stages of image processing, gridding, segmentation, compression, quantification, and normalization Features cutting-edge approaches to clustering, biclustering, and the reconstruction of regulatory networks Covers different types of microarrays such as DNA, protein, tissue, and low- and high-density oligonucleotide arrays Examines the current state of various microarray technologies, including their availability and affordability Explains how data generated by microarray experiments are analyzed to obtain meaningful biological conclusions An essential reference for academia and industry, Microarray Image and Data Analysis: Theory and Practice provides readers with valuable tools and techniques that extend to a wide range of biological studies and microarray platforms.
Title Page -- Contents -- If Ontology is the Solution, What is the Problem? -- Biodynamic Ontology: Applying BFO in the Biomedical Domain -- Bodily Systems and the Spatial-Functional Structure of the Human Body -- Inflammation Ontology Design Pattern: An Exercise in Building a Core Biomedical Ontology With Descriptions and Situations -- Context-Based Task Ontologies for Clinical Guidelines -- An Ontological Framework for the Implementation of Clinical Guidelines in Health Care Organizations -- Gene Ontology Application to Genomic Functional Annotation, Statistical Analysis and Knowledge Mining -- Evolving from Standard Vocabularies to Formal Ontology for an Information System Dedicated to Organ Transplantation -- Mistakes in Medical Ontologies: Where Do They Come From and How Can They Be Detected? -- Author Index